Ciro Santilli
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中国独裁统治 China Dictatorship 新疆改造中心、六四事件、法轮功、郝海东、709大抓捕、2015巴拿马文件 邓家贵、低端人口、西藏骚乱
Species
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"Taxonomy"
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"Taxonomy"
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toc
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wiki
Table of contents
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Virus
link
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"Species"
0
Virus classification
link
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"Virus"
0
Bacteriophage
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"Virus classification"
0
Baltimore classification
link
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"Virus classification"
0
Positive-strand RNA virus (+ssRNA)
link
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"Baltimore classification"
11
Coronavirus
link
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"Virus"
15
Coronavirus Replication Cycle
link
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"Coronavirus"
8
COVID-19
link
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"Coronavirus"
55
Why it takes several days to enter inflammatory phase in COVID-19?
link
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"COVID-19"
102
Why is COVID-19 so serious in some people but not in others?
link
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"COVID-19"
37
Why is COVID-19 more serious than the flu?
link
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"COVID-19"
0
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
link
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"COVID-19"
21
Variants of SARS-CoV-2
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"Severe acute respiratory syndrome coronavirus 2"
0
SARS-CoV-2 cell entry
link
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"Severe acute respiratory syndrome coronavirus 2"
24
SARS-CoV-2 gene
link
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"Severe acute respiratory syndrome coronavirus 2"
20
ORF1ab
link
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"SARS-CoV-2 gene"
7
SARS-CoV-2 protein
link
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"Severe acute respiratory syndrome coronavirus 2"
0
SARS-CoV-2 structural protein
link
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"SARS-CoV-2 protein"
0
SARS-CoV-2 E protein (envelope)
link
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"SARS-CoV-2 structural protein"
6
SARS-CoV-2 M protein (membrane)
link
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"SARS-CoV-2 structural protein"
6
SARS-CoV-2 S protein (spike)
link
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"SARS-CoV-2 structural protein"
25
SARS-CoV-2 N protein
link
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"SARS-CoV-2 structural protein"
0
SARS-CoV-2 non-structural protein
link
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"SARS-CoV-2 protein"
8
SARS-CoV-2 Nsp3
link
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"SARS-CoV-2 non-structural protein"
2
SARS-CoV-2 Nsp5
link
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"SARS-CoV-2 non-structural protein"
12
SARS-CoV-2 Nsp12
link
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"SARS-CoV-2 non-structural protein"
7
SARS-CoV-2 accessory protein
link
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"SARS-CoV-2 protein"
17
Dengue virus
link
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"Virus"
0
Retrovirus
link
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"Virus"
45
Integrase
link
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"Retrovirus"
0
Reverse transcriptase
link
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"Retrovirus"
18
HIV
link
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"Retrovirus"
0
AIDS
link
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"HIV"
0
HIV vaccine
link
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"HIV"
0
Bacteria
link
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"Species"
2
Bacterial cellular morphogology
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"Bacteria"
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Bacterial cell structure
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"Bacteria"
0
Bacterial cell wall
link
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"Bacterial cell structure"
9
Bacterial conjugation (bacterial sex)
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"Bacteria"
2
Origin of transfer
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"Bacterial conjugation"
0
Bacterial genome
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"Bacteria"
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Bacterial chromosome is circular
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"Bacterial genome"
0
Gram stain
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"Bacteria"
0
Gram-positive bacteria
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"Gram stain"
0
Gram-negative bacteria
link
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"Gram stain"
6
Bacterial outer membrane
link
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"Gram-negative bacteria"
8
Periplasm
link
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"Bacterial outer membrane"
6
List of bacteria
link
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"Bacteria"
0
Escherichia coli (E. Coli)
link
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"List of bacteria"
74
E. Coli replication time
link
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"Escherichia coli"
52
E. Coli starts DNA replication before the previous one finished
link
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"Escherichia coli"
1
E. Coli origin of replication
link
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"Escherichia coli"
18
E. Coli genome starting point
link
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"E. Coli origin of replication"
87
E. Coli whole cell simulation
link
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"Escherichia coli"
0
E. Coli Whole Cell Model by Covert Lab (CovertLab/WholeCellEcoliRelease)
link
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"E. Coli whole cell simulation"
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1. Install and first run
link
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"E. Coli Whole Cell Model by Covert Lab"
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2. Output overview
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"E. Coli Whole Cell Model by Covert Lab"
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2.1. Mass fracion summary plot analysis
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"Output overview"
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3. Run variants
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"E. Coli Whole Cell Model by Covert Lab"
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3.1. Default run variant
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"Run variants"
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3.2. Time series run variant
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"Run variants"
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4. Other run variants
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"E. Coli Whole Cell Model by Covert Lab"
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5. Source code overview
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"E. Coli Whole Cell Model by Covert Lab"
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5.1. Condition
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"Source code overview"
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6. Model validation
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"E. Coli Whole Cell Model by Covert Lab"
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7. Publications
link
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"E. Coli Whole Cell Model by Covert Lab"
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Multi-Omics Model and Analytics (MOMA, 2016)
link
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"E. Coli whole cell simulation"
18
E. Coli Metabolome Database
link
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"Escherichia coli"
0
E. Coli strain
link
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"Escherichia coli"
3
E. Coli K-12
link
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"E. Coli strain"
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E. Coli K-12 MG1655
link
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"E. Coli K-12"
152
E. Coli K-12 MG1655 origin of replication (3,925,744-3,925,975)
link
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"E. Coli K-12 MG1655"
14
E. Coli K-12 MG1655 gene
link
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"E. Coli K-12 MG1655"
0
E. Coli K-12 MG1655 gene thrL (190-255, thr operon leader
peptide
)
link
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"E. Coli K-12 MG1655 gene"
150
E. Coli K-12 MG1655 gene thrA (337-2799, fused aspartate kinase/homoserine dehydrogenase 1)
link
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"E. Coli K-12 MG1655 gene"
546
E. Coli K-12 MG1655 gene thrB (2,801-3,733)
link
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"E. Coli K-12 MG1655 gene"
6
E. Coli K-12 MG1655 gene thrC
link
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"E. Coli K-12 MG1655 gene"
3
E. Coli K-12 MG1655 gene yaaX (5,234-5,530)
link
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"E. Coli K-12 MG1655 gene"
9
E. Coli K-12 MG1655 gene dksA (160,604-160,149)
link
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"E. Coli K-12 MG1655 gene"
0
E. Coli K-12 MG1655 gene lrp (932,595-933,089)
link
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"E. Coli K-12 MG1655 gene"
0
E. Coli K-12 MG1655 gene fnr (1,398,774-1,399,526)
link
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"E. Coli K-12 MG1655 gene"
7
E. Coli K-12 MG1655 gene arcA (4,639,590-4,640,306)
link
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"E. Coli K-12 MG1655 gene"
25
E. Coli K-12 MG1655 gene ytdX (5,234-5,530)
link
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"E. Coli K-12 MG1655 gene"
7
E. Coli K-12 MG1655 gene of unknown function
link
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"E. Coli K-12 MG1655"
65
E. Coli K-12 MG1655 promoter
link
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"E. Coli K-12 MG1655"
62
E. Coli K-12 MG1655 promoter thrLp (148)
link
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"E. Coli K-12 MG1655 promoter"
3
E. Coli K-12 MG1655 operon thrLABC
link
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"E. Coli K-12 MG1655 promoter thrLp"
114
E. Coli K-12 MG1655 transcription unit thrL
link
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"E. Coli K-12 MG1655 promoter thrLp"
9
E. Coli K-12 MG1655 transcription unit thrLABC
link
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"E. Coli K-12 MG1655 promoter thrLp"
7
Mycoplasma
link
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"List of bacteria"
19
Mycoplasma genitalium (M. genitalium)
link
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"Mycoplasma"
317
M. genitalium strain
link
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"Mycoplasma genitalium"
0
JCVI-syn3A (2019)
link
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"M. genitalium strain"
61
Essential metabolism for a minimal cell (2019)
link
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"JCVI-syn3A"
0
JCVI-syn3.0 (2016)
link
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"M. genitalium strain"
8
M. genitalium whole cell simulation
link
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"Mycoplasma genitalium"
0
Lattice Microbes (2022)
link
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"M. genitalium whole cell simulation"
85
M. genitalium whole cell model by Covert lab
link
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"M. genitalium whole cell simulation"
26
Arkarya
link
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"Species"
23
Archaea
link
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"Arkarya"
59
Eukaryote
link
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"Species"
2
Advantage of eukaryote over bacteria
link
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"Eukaryote"
0
Eukaryotes can do phatocytosis due to their cytoskeleton
link
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"Advantage of eukaryote over bacteria"
53
Eukarya subclade
link
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"Eukaryote"
0
Animal
link
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"Eukarya subclade"
8
Animal anatomy
link
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"Animal"
0
Anus
link
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"Animal anatomy"
0
Cloaca
link
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"Animal anatomy"
11
Animal flight
link
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"Animal"
0
Warm-blooded
link
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"Animal"
0
Homeothermy
link
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"Warm-blooded"
23
Animal subclade
link
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"Animal"
3
Arthropod
link
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"Animal subclade"
0
Drosophila melanogaster (Common fruit fly)
link
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"Arthropod"
0
Chordate
link
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"Animal subclade"
0
Chordate subclade
link
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"Animal subclade"
0
Vertebrate
link
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"Chordate subclade"
0
Vertebrate subclade
link
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"Vertebrate"
0
Tetrapod
link
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"Vertebrate subclade"
57
Tetrapod subclade
link
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"Tetrapod"
0
Amphibian
link
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"Tetrapod subclade"
0
Amniote
link
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"Tetrapod subclade"
49
Amnion
link
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"Amniote"
0
Amniote subclade
link
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"Amniote"
0
Sauropsida
link
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"Amniote subclade"
0
Reptile
link
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"Sauropsida"
22
Sauropsida subclade
link
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"Sauropsida"
0
Bird
link
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"Sauropsida subclade"
0
Synapsid
link
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"Amniote subclade"
26
Synapsid subclade
link
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"Synapsid"
0
Mammal
link
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"Synapsid subclade"
2
Milk
link
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"Mammal"
0
Mammal subclade
link
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"Mammal"
0
Monotreme
link
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"Mammal subclade"
64
Theria
link
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"Mammal subclade"
27
Theria subclade
link
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"Theria"
0
Marsupial
link
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"Theria subclade"
28
Placentalia
link
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"Theria subclade"
0
Placenta
link
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"Placentalia"
0
Placentalia subclade
link
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"Placentalia"
0
Bat
link
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"Placentalia subclade"
29
Mouse
link
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"Placentalia subclade"
0
House mouse (Mus musculus)
link
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"Mouse"
0
Mouse mutant
link
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"House mouse"
17
Genetically modified mouse
link
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"Mouse mutant"
0
Knockout mouse
link
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"Mouse mutant"
8
Human
link
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"Placentalia subclade"
0
Human body
link
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"Human"
0
Human cell type
link
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"Human body"
0
Human Cell Atlas
link
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"Human cell type"
0
Human immortalised cell line
link
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"Human cell type"
0
HeLa (1951)
link
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"Human immortalised cell line"
0
HEK 293 cell (1973)
link
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"Human immortalised cell line"
0
Human molecular biology
link
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"Human body"
0
Human proteome
link
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"Human molecular biology"
0
Human genome
link
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"Human molecular biology"
0
Human chromosome
link
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"Human genome"
0
Human genetic variation
link
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"Human genome"
0
Personal Genome Project
link
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"Human genetic variation"
0
Human Phenotype Ontology
link
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"Human genetic variation"
0
ABO blood group system
link
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"Human genetic variation"
0
Human mtDNA
link
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"Human genome"
0
Cambridge Reference Sequence (1981, first human mtDNA full sequencing)
link
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"Human mtDNA"
0
Sequence and organization of the human mitochondrial genome by Sanger et al. (1981)
link
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"Cambridge Reference Sequence"
0
Human mitochondrial DNA haplogroup
link
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"Human genome"
0
Human genome sequencing project
link
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"Human genome"
0
Human Genome Project (2003, first largs scale sequencing of a human genome)
link
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"Human genome sequencing project"
0
2015 Iceland genome sequencing studies
link
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"Human genome sequencing project"
0
100,000 Genomes Project (2018, UK)
link
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"Human genome sequencing project"
0
Human protein
link
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"Human genome"
0
Angiotensin-converting enzyme 2
link
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"Human protein"
0
TMPRSS2
link
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"Human protein"
0
Human body system
link
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"Human body"
0
Human nervous system
link
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"Human body system"
0
Recurrent laryngeal nerve
link
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"Human nervous system"
0
Transhumanism
link
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"Human"
0
Brain in a vat
link
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"Transhumanism"
0
Nematode
link
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"Animal subclade"
0
Caenorhabditis elegans (C. elegans)
link
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"Nematode"
25
C. elegans cell lineage
link
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"Caenorhabditis elegans"
25
C. elegans models and databases
link
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"Caenorhabditis elegans"
0
WormAtlas
link
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"C. elegans models and databases"
0
OpenWorm
link
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"Caenorhabditis elegans"
17
Fungus
link
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"Eukarya subclade"
5
Mold
link
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"Fungus"
0
Yeast
link
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"Fungus"
23
Saccharomyces cerevisiae (S. cerevisiae)
link
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"Fungus"
22
Plant
link
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"Eukarya subclade"
5
Borlotti beans
link
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"Plant"
249
Pinto bean
link
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"Plant"
73
Extraterrestrial life (alien)
link
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"Species"
0
Search for extraterrestrial intelligence (SETI)
link
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"Extraterrestrial life"
0
Communication with extraterrestrial intelligence (CETI)
link
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"Search for extraterrestrial intelligence"
0
Arecibo message
link
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"Communication with extraterrestrial intelligence"
0
Ancestors
Taxonomy
Biology
Natural science
Science
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Cell type
Chromosome
Omics
Proteome
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